FEPEX is organised around four decision-making bodies:
The General Assembly, In which all the Federation’s social base is properly represented.
Executive Committee, consisting of chairmen from Member Associatioins and chairmen of the industry and domain committees.
The Industry Committees (organised by products or groups of products), consider the specific questions that affect each crop and adopt the necessary measures to improve the conditions for the production, commercialization and promotion of their products.
Domain Committees act as consultative bodies for the Federation and their specific mission is to analyse all the problems that may arise in their functional field, and are also responsible for making proposals to the Governing bodies. FEPEX currently has such committees for labour relations, quality and commercialization.